HL_7UW1_034

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGUUGGUUG

Length

9 nucleotides

Bulged bases

7UW1|1|A|U|1448, 7UW1|1|A|U|1449

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_034 not in the Motif Atlas

Geometric match to HL_5J7L_169

Geometric discrepancy: 0.0709

The information below is about HL_5J7L_169

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_22622.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7UW1|1|A|C|1446
7UW1|1|A|G|1447
7UW1|1|A|U|1448
7UW1|1|A|U|1449
7UW1|1|A|G|1450
7UW1|1|A|G|1451
7UW1|1|A|U|1452
7UW1|1|A|U|1453
7UW1|1|A|G|1454

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L17