HL_7UW1_063

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7UW1|1|A|G|2747, 7UW1|1|A|C|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_063 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0826

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7UW1|1|A|C|2741
7UW1|1|A|U|2742
7UW1|1|A|G|2743
7UW1|1|A|A|2744
7UW1|1|A|A|2745
7UW1|1|A|A|2746
7UW1|1|A|G|2747
7UW1|1|A|C|2748
7UW1|1|A|A|2749
7UW1|1|A|U|2750
7UW1|1|A|C|2751
7UW1|1|A|U|2752
7UW1|1|A|A|2753
7UW1|1|A|A|2754
7UW1|1|A|G|2755

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain G

50S ribosomal protein L6