HL_7UW1_083

3D structure

PDB id

7UW1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii 70S ribosome-Streptothricin-D complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UW1_083 not in the Motif Atlas

Homologous match to HL_4LFB_015

Geometric discrepancy: 0.0902

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7UW1|1|a|C|686
7UW1|1|a|G|687
7UW1|1|a|G|688
7UW1|1|a|U|689
7UW1|1|a|G|690
7UW1|1|a|A|691
7UW1|1|a|A|692
7UW1|1|a|A|693
7UW1|1|a|U|694
7UW1|1|a|G|695

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11

Chain u

30S ribosomal protein S21