HL_7V9E_002

3D structure

PDB id

7V9E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a methyl transferase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.3 Å

Loop

Sequence

UGAAA*A

Length

6 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7V9E_002 not in the Motif Atlas

Geometric match to HL_7A0S_044

Geometric discrepancy: 0.1847

The information below is about HL_7A0S_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80709.5

Basepair signature

cWW-F-F-F

Number of instances in this motif group

12

Unit IDs

7V9E|1|A|U|52
7V9E|1|A|G|53
7V9E|1|A|A|54
7V9E|1|A|A|55
7V9E|1|A|A|57
*
7V9E|1|A|A|57

Current chains

Chain A

RNA (68-MER)

Nearby chains