3D structure

PDB id
7WTU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GCCAAU
Length
6 nucleotides
Bulged bases
None detected
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7WTU|1|2|G|613
7WTU|1|2|C|614
7WTU|1|2|C|615
7WTU|1|2|A|628
7WTU|1|2|A|629
7WTU|1|2|U|630

Current chains

Chain 2
18S rRNA

Nearby chains

Chain X
40S ribosomal protein S23
Chain q
Probable 18S rRNA (guanine-N(7))-methyltransferase
Chain u
Pre-rRNA-processing protein TSR1 homolog

Coloring options:

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