HL_7WTW_026

3D structure

PDB id

7WTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTW_026 not in the Motif Atlas

Homologous match to HL_8C3A_222

Geometric discrepancy: 0.4328

The information below is about HL_8C3A_222

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

8

Unit IDs

7WTW|1|2|C|1460
7WTW|1|2|G|1461
7WTW|1|2|U|1462
7WTW|1|2|U|1463
7WTW|1|2|C|1464
7WTW|1|2|A|1465
7WTW|1|2|G|1466

Current chains

Chain 2

18S rRNA

Nearby chains

Chain K

RRP12-like protein

Chain R

40S ribosomal protein S17