HL_7WTZ_010

3D structure

PDB id

7WTZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACCCG

Length

7 nucleotides

Bulged bases

7WTZ|1|2|C|502, 7WTZ|1|2|C|503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WTZ_010 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1534

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7WTZ|1|2|C|498
7WTZ|1|2|G|499
7WTZ|1|2|A|500
7WTZ|1|2|C|501
7WTZ|1|2|C|502
7WTZ|1|2|C|503
7WTZ|1|2|G|504

Current chains

Chain 2

18S rRNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain Y

40S ribosomal protein S24