HL_7WU0_022

3D structure

PDB id

7WU0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGCAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7WU0_022 not in the Motif Atlas

Geometric match to HL_3LQX_001

Geometric discrepancy: 0.0867

The information below is about HL_3LQX_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7WU0|1|2|U|1178
7WU0|1|2|G|1179
7WU0|1|2|C|1180
7WU0|1|2|A|1181
7WU0|1|2|A|1182
7WU0|1|2|A|1183

Current chains

Chain 2

18S rRNA

Nearby chains

Chain t

Protein LTV1 homolog