HL_7XAM_018

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUG

Length

4 nucleotides

Bulged bases

7XAM|1|A|G|635, 7XAM|1|A|U|636

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7XAM_018 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.219

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7XAM|1|A|C|634
7XAM|1|A|G|635
7XAM|1|A|U|636
7XAM|1|A|G|637

Current chains

Chain A

23S rRNA

Nearby chains