HL_7XAM_049
3D structure
- PDB id
- 7XAM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7XAM|1|A|A|1997, 7XAM|1|A|C|1998, 7XAM|1|A|U|1999, 7XAM|1|A|A|2003
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7XAM_049 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.0941
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7XAM|1|A|U|1994
7XAM|1|A|U|1995
7XAM|1|A|U|1996
7XAM|1|A|A|1997
7XAM|1|A|C|1998
7XAM|1|A|U|1999
7XAM|1|A|A|2000
7XAM|1|A|A|2001
7XAM|1|A|A|2002
7XAM|1|A|A|2003
7XAM|1|A|A|2004
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain d
- 50S ribosomal protein L34
Coloring options: