HL_7XAM_055

3D structure

PDB id

7XAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAUAUCC

Length

8 nucleotides

Bulged bases

7XAM|1|A|U|2437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7XAM_055 not in the Motif Atlas

Homologous match to HL_5J7L_185

Geometric discrepancy: 0.2403

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7XAM|1|A|G|2432
7XAM|1|A|U|2433
7XAM|1|A|A|2434
7XAM|1|A|U|2435
7XAM|1|A|A|2436
7XAM|1|A|U|2437
7XAM|1|A|C|2438
7XAM|1|A|C|2439

Current chains

Chain A

23S rRNA

Nearby chains