HL_7XNY_017
3D structure
- PDB id
- 7XNY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UCGCACGAAA
- Length
- 10 nucleotides
- Bulged bases
- 7XNY|1|L1|C|1365, 7XNY|1|L1|G|1366, 7XNY|1|L1|C|1367, 7XNY|1|L1|A|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7XNY|1|L1|U|1364
7XNY|1|L1|C|1365
7XNY|1|L1|G|1366
7XNY|1|L1|C|1367
7XNY|1|L1|A|1368
7XNY|1|L1|C|1369
7XNY|1|L1|G|1370
7XNY|1|L1|A|1371
7XNY|1|L1|A|1372
7XNY|1|L1|A|1373
Current chains
- Chain L1
- 28S rRNA
Nearby chains
- Chain L3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- 60S ribosomal protein L4
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- 60S ribosomal protein L15
- Chain LY
- 60S ribosomal protein L26
Coloring options: