HL_7Y41_073

3D structure

PDB id

7Y41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y41_073 not in the Motif Atlas

Homologous match to HL_5J7L_202

Geometric discrepancy: 0.1249

The information below is about HL_5J7L_202

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7Y41|1|A|A|3077
7Y41|1|A|G|3078
7Y41|1|A|U|3079
7Y41|1|A|A|3080
7Y41|1|A|A|3081
7Y41|1|A|U|3082

Current chains

Chain A

23S ribosomal RNA

Nearby chains