HL_7Y7C_008

3D structure

PDB id

7Y7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.51 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7C_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0833

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7Y7C|1|A|A|320
7Y7C|1|A|A|321
7Y7C|1|A|C|322
7Y7C|1|A|U|323
7Y7C|1|A|G|324
7Y7C|1|A|A|325
7Y7C|1|A|G|326
7Y7C|1|A|A|327
7Y7C|1|A|C|328
7Y7C|1|A|A|329
7Y7C|1|A|C|330
7Y7C|1|A|G|331
7Y7C|1|A|G|332
7Y7C|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20