HL_7Y7C_084

3D structure

PDB id

7Y7C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.51 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7Y7C|1|a|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7C_084 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.06

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7Y7C|1|a|G|1949
7Y7C|1|a|G|1950
7Y7C|1|a|U|1951
7Y7C|1|a|A|1952
7Y7C|1|a|A|1953
7Y7C|1|a|G|1954
7Y7C|1|a|U|1955
7Y7C|1|a|U|1956
7Y7C|1|a|C|1957

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain j

50S ribosomal protein L14