HL_7Y7C_107
3D structure
- PDB id
- 7Y7C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.51 Å
Loop
- Sequence
- (PSU)AGUGG(H2U)GAG
- Length
- 10 nucleotides
- Bulged bases
- 7Y7C|1|V|G|17, 7Y7C|1|V|G|18, 7Y7C|1|V|G|20
- QA status
- Modified nucleotides: PSU, H2U
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Y7C_107 not in the Motif Atlas
- Homologous match to HL_1IL2_007
- Geometric discrepancy: 0.5976
- The information below is about HL_1IL2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_45175.1
- Basepair signature
- cWW-cWS-F-F
- Number of instances in this motif group
- 5
Unit IDs
7Y7C|1|V|PSU|13
7Y7C|1|V|A|14
7Y7C|1|V|G|15
7Y7C|1|V|U|16
7Y7C|1|V|G|17
7Y7C|1|V|G|18
7Y7C|1|V|H2U|19
7Y7C|1|V|G|20
7Y7C|1|V|A|21
7Y7C|1|V|G|22
Current chains
- Chain V
- A-site tRNA-Asp
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: