HL_7Y7D_081

3D structure

PDB id

7Y7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7D_081 not in the Motif Atlas

Geometric match to HL_5D5L_001

Geometric discrepancy: 0.1771

The information below is about HL_5D5L_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7Y7D|1|a|C|1868
7Y7D|1|a|G|1869
7Y7D|1|a|C|1870
7Y7D|1|a|A|1871
7Y7D|1|a|A|1872
7Y7D|1|a|G|1873

Current chains

Chain a

23S rRNA

Nearby chains