3D structure

PDB id
7Y7E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.41 Å

Loop

Sequence
CGCGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7Y7E_027 not in the Motif Atlas
Homologous match to HL_5J7L_027
Geometric discrepancy: 0.1046
The information below is about HL_5J7L_027
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.7
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
349

Unit IDs

7Y7E|1|A|C|1265
7Y7E|1|A|G|1266
7Y7E|1|A|C|1267
7Y7E|1|A|G|1268
7Y7E|1|A|A|1269
7Y7E|1|A|G|1270

Current chains

Chain A
16S rRNA

Nearby chains

Chain M
30S ribosomal protein S13
Chain S
30S ribosomal protein S19

Coloring options:


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