HL_7Y7E_036

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

G(OMC)UCAUAAC

Length

9 nucleotides

Bulged bases

7Y7E|1|Z|U|34

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_036 not in the Motif Atlas

Homologous match to HL_6CFJ_107

Geometric discrepancy: 0.074

The information below is about HL_6CFJ_107

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_06059.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

7Y7E|1|Z|G|32
7Y7E|1|Z|OMC|33
7Y7E|1|Z|U|34
7Y7E|1|Z|C|35
7Y7E|1|Z|A|36
7Y7E|1|Z|U|37
7Y7E|1|Z|A|38
7Y7E|1|Z|A|39
7Y7E|1|Z|C|40

Current chains

Chain Z

P-site tRNA-fMet

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain I

30S ribosomal protein S9

Chain X

mRNA