HL_7Y7E_052

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

7Y7E|1|a|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_052 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.071

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7Y7E|1|a|C|487
7Y7E|1|a|G|488
7Y7E|1|a|G|489
7Y7E|1|a|C|490
7Y7E|1|a|G|491
7Y7E|1|a|A|492
7Y7E|1|a|G|493

Current chains

Chain a

23S rRNA

Nearby chains

Chain r

50S ribosomal protein L22