HL_7Y7E_093

3D structure

PDB id

7Y7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.41 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7Y7E|1|a|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7E_093 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0541

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7Y7E|1|a|U|2404
7Y7E|1|a|G|2405
7Y7E|1|a|A|2406
7Y7E|1|a|A|2407
7Y7E|1|a|U|2408
7Y7E|1|a|G|2409
7Y7E|1|a|G|2410
7Y7E|1|a|A|2411
7Y7E|1|a|A|2412
7Y7E|1|a|G|2413

Current chains

Chain a

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L15