HL_7Y7H_088

3D structure

PDB id

7Y7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.51 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Y7H_088 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.0737

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7Y7H|1|a|G|2303
7Y7H|1|a|G|2304
7Y7H|1|a|U|2305
7Y7H|1|a|C|2306
7Y7H|1|a|G|2307
7Y7H|1|a|G|2308
7Y7H|1|a|A|2309
7Y7H|1|a|C|2310
7Y7H|1|a|A|2311
7Y7H|1|a|U|2312
7Y7H|1|a|C|2313

Current chains

Chain a

23S rRNA

Nearby chains

Chain f

50S ribosomal protein L5