HL_7YLA_011
3D structure
- PDB id
- 7YLA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-HflX complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7YLA|1|I|G|329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7YLA_011 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.0746
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
7YLA|1|I|G|327
7YLA|1|I|U|328
7YLA|1|I|G|329
7YLA|1|I|A|330
7YLA|1|I|C|331
7YLA|1|I|A|332
7YLA|1|I|G|333
7YLA|1|I|C|334
7YLA|1|I|C|335
Current chains
- Chain I
- Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome
Nearby chains
- Chain M
- 50S ribosomal protein L4
- Chain c
- 50S ribosomal protein L24
Coloring options: