HL_7YLA_021

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

GGGUAACACU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7YLA_021 not in the Motif Atlas

Geometric match to HL_5J7L_212

Geometric discrepancy: 0.3254

The information below is about HL_5J7L_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7YLA|1|I|G|711
7YLA|1|I|G|712
7YLA|1|I|G|713
7YLA|1|I|U|714
7YLA|1|I|A|715
7YLA|1|I|A|716
7YLA|1|I|C|717
7YLA|1|I|A|718
7YLA|1|I|C|719
7YLA|1|I|U|720

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain K

50S ribosomal protein L2