HL_7YLA_022
3D structure
- PDB id
- 7YLA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-HflX complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.52 Å
Loop
- Sequence
- UG(PSU)UGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 7YLA|1|I|U|747, 7YLA|1|I|A|751, 7YLA|1|I|A|752
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7YLA_022 not in the Motif Atlas
- Homologous match to HL_4WF9_023
- Geometric discrepancy: 0.2767
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7YLA|1|I|U|744
7YLA|1|I|G|745
7YLA|1|I|PSU|746
7YLA|1|I|U|747
7YLA|1|I|G|748
7YLA|1|I|A|749
7YLA|1|I|A|750
7YLA|1|I|A|751
7YLA|1|I|A|752
7YLA|1|I|A|753
Current chains
- Chain I
- Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
- Chain k
- 50S ribosomal protein L34
Coloring options: