HL_7YLA_059

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7YLA|1|I|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7YLA_059 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0656

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7YLA|1|I|U|2404
7YLA|1|I|G|2405
7YLA|1|I|A|2406
7YLA|1|I|A|2407
7YLA|1|I|U|2408
7YLA|1|I|G|2409
7YLA|1|I|G|2410
7YLA|1|I|A|2411
7YLA|1|I|A|2412
7YLA|1|I|G|2413

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain T

50S ribosomal protein L15