HL_7YLA_066

3D structure

PDB id

7YLA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-HflX complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.52 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7YLA|1|I|G|2751, 7YLA|1|I|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7YLA_066 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0669

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7YLA|1|I|C|2745
7YLA|1|I|U|2746
7YLA|1|I|G|2747
7YLA|1|I|A|2748
7YLA|1|I|A|2749
7YLA|1|I|A|2750
7YLA|1|I|G|2751
7YLA|1|I|C|2752
7YLA|1|I|A|2753
7YLA|1|I|U|2754
7YLA|1|I|C|2755
7YLA|1|I|U|2756
7YLA|1|I|A|2757
7YLA|1|I|A|2758
7YLA|1|I|G|2759

Current chains

Chain I

Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genome

Nearby chains

Chain O

50S ribosomal protein L6

Chain R

50S ribosomal protein L13

Chain m

50S ribosomal protein L36