HL_7Z20_023

3D structure

PDB id

7Z20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z20_023 not in the Motif Atlas

Geometric match to HL_5J7L_154

Geometric discrepancy: 0.1297

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7Z20|1|b|G|711
7Z20|1|b|G|712
7Z20|1|b|U|713
7Z20|1|b|A|714
7Z20|1|b|A|715
7Z20|1|b|C|716
7Z20|1|b|A|717
7Z20|1|b|C|718

Current chains

Chain b

23S rRNA

Nearby chains

Chain c

50S ribosomal protein L2