HL_7Z20_053

3D structure

PDB id

7Z20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

GUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCAC

Length

57 nucleotides

Bulged bases

7Z20|1|b|G|2122, 7Z20|1|b|G|2123, 7Z20|1|b|U|2129, 7Z20|1|b|U|2130, 7Z20|1|b|G|2143, 7Z20|1|b|A|2146, 7Z20|1|b|U|2148, 7Z20|1|b|G|2158

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7Z20|1|b|G|2120
7Z20|1|b|U|2121
7Z20|1|b|G|2122
7Z20|1|b|G|2123
7Z20|1|b|G|2124
7Z20|1|b|A|2125
7Z20|1|b|G|2126
7Z20|1|b|G|2127
7Z20|1|b|C|2128
7Z20|1|b|U|2129
7Z20|1|b|U|2130
7Z20|1|b|A|2131
7Z20|1|b|G|2132
7Z20|1|b|A|2133
7Z20|1|b|A|2134
7Z20|1|b|G|2135
7Z20|1|b|U|2136
7Z20|1|b|G|2137
7Z20|1|b|U|2138
7Z20|1|b|G|2139
7Z20|1|b|G|2140
7Z20|1|b|A|2141
7Z20|1|b|C|2142
7Z20|1|b|G|2143
7Z20|1|b|C|2144
7Z20|1|b|C|2145
7Z20|1|b|A|2146
7Z20|1|b|G|2147
7Z20|1|b|U|2148
7Z20|1|b|C|2149
7Z20|1|b|U|2150
7Z20|1|b|G|2151
7Z20|1|b|C|2152
7Z20|1|b|A|2153
7Z20|1|b|U|2154
7Z20|1|b|G|2155
7Z20|1|b|G|2156
7Z20|1|b|A|2157
7Z20|1|b|G|2158
7Z20|1|b|C|2159
7Z20|1|b|C|2160
7Z20|1|b|G|2161
7Z20|1|b|A|2162
7Z20|1|b|C|2163
7Z20|1|b|C|2164
7Z20|1|b|U|2165
7Z20|1|b|U|2166
7Z20|1|b|G|2167
7Z20|1|b|A|2168
7Z20|1|b|A|2169
7Z20|1|b|A|2170
7Z20|1|b|U|2171
7Z20|1|b|A|2172
7Z20|1|b|C|2173
7Z20|1|b|C|2174
7Z20|1|b|A|2175
7Z20|1|b|C|2176

Current chains

Chain b

23S rRNA

Nearby chains