HL_7Z20_055
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7Z20|1|b|G|2249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Z20_055 not in the Motif Atlas
- Geometric match to HL_4WF9_049
- Geometric discrepancy: 0.1012
- The information below is about HL_4WF9_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
7Z20|1|b|C|2247
7Z20|1|b|U|2248
7Z20|1|b|G|2249
7Z20|1|b|G|2250
7Z20|1|b|G|2251
7Z20|1|b|G|2252
7Z20|1|b|C|2253
7Z20|1|b|G|2254
7Z20|1|b|G|2255
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L16
- Chain v
- Transfer RNA; tRNA
- Chain y
- 50S ribosomal protein L27
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