HL_7Z34_044

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7Z34|1|1|U|1925

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_044 not in the Motif Atlas

Geometric match to HL_4WF9_040

Geometric discrepancy: 0.2468

The information below is about HL_4WF9_040

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

7Z34|1|1|C|1923
7Z34|1|1|U|1924
7Z34|1|1|U|1925
7Z34|1|1|C|1926
7Z34|1|1|G|1927
7Z34|1|1|G|1928

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain p

60S ribosomal protein L43-A