HL_7Z34_052

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUCUAAUUAGU

Length

11 nucleotides

Bulged bases

7Z34|1|1|U|2298, 7Z34|1|1|G|2300

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_052 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2744

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

7Z34|1|1|A|2291
7Z34|1|1|U|2292
7Z34|1|1|C|2293
7Z34|1|1|U|2294
7Z34|1|1|A|2295
7Z34|1|1|A|2296
7Z34|1|1|U|2297
7Z34|1|1|U|2298
7Z34|1|1|A|2299
7Z34|1|1|G|2300
7Z34|1|1|U|2301

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain V

60S ribosomal protein L23-A