3D structure

PDB id
7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of pre-60S particle bound to DRG1(AFG2)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
UCAAGCGUUCAUAGCGACA
Length
19 nucleotides
Bulged bases
7Z34|1|1|U|2842, 7Z34|1|1|U|2843, 7Z34|1|1|C|2844, 7Z34|1|1|A|2845, 7Z34|1|1|U|2846
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7Z34|1|1|U|2835
7Z34|1|1|C|2836
7Z34|1|1|A|2837
7Z34|1|1|A|2838
7Z34|1|1|G|2839
7Z34|1|1|C|2840
7Z34|1|1|G|2841
7Z34|1|1|U|2842
7Z34|1|1|U|2843
7Z34|1|1|C|2844
7Z34|1|1|A|2845
7Z34|1|1|U|2846
7Z34|1|1|A|2847
7Z34|1|1|G|2848
7Z34|1|1|C|2849
7Z34|1|1|G|2850
7Z34|1|1|A|2851
7Z34|1|1|C|2852
7Z34|1|1|A|2853

Current chains

Chain 1
35S pre-ribosomal RNA

Nearby chains

Chain 2
5S ribosomal RNA; 5S rRNA
Chain T
60S ribosomal protein L21-A
Chain b
Nucleolar GTP-binding protein 1
Chain r
Ribosome biogenesis protein NSA2

Coloring options:

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