HL_7Z34_073

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUAUACGAC

Length

9 nucleotides

Bulged bases

7Z34|1|1|U|3304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z34_073 not in the Motif Atlas

Geometric match to HL_5TBW_070

Geometric discrepancy: 0.3486

The information below is about HL_5TBW_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

7Z34|1|1|G|3303
7Z34|1|1|U|3304
7Z34|1|1|A|3305
7Z34|1|1|U|3306
7Z34|1|1|A|3307
7Z34|1|1|C|3308
7Z34|1|1|G|3309
7Z34|1|1|A|3310
7Z34|1|1|C|3311

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain P

60S ribosomal protein L17-A

Chain d

60S ribosomal protein L31-A