HL_7Z3N_081

3D structure

PDB id

7Z3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUGAGAAACGG

Length

12 nucleotides

Bulged bases

7Z3N|1|2|A|397, 7Z3N|1|2|C|399, 7Z3N|1|2|G|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3N_081 not in the Motif Atlas

Homologous match to HL_4V88_195

Geometric discrepancy: 0.1554

The information below is about HL_4V88_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06226.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7Z3N|1|2|C|390
7Z3N|1|2|C|391
7Z3N|1|2|U|392
7Z3N|1|2|G|393
7Z3N|1|2|A|394
7Z3N|1|2|G|395
7Z3N|1|2|A|396
7Z3N|1|2|A|397
7Z3N|1|2|A|398
7Z3N|1|2|C|399
7Z3N|1|2|G|400
7Z3N|1|2|G|401

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SG

40S ribosomal protein S6

Chain SI

40S ribosomal protein S8