HL_7Z3O_005

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUGGAACG

Length

8 nucleotides

Bulged bases

7Z3O|1|1|C|194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_005 not in the Motif Atlas

Homologous match to HL_8C3A_005

Geometric discrepancy: 0.1206

The information below is about HL_8C3A_005

Detailed Annotation

T-loop with 2 stacked bulged bases

Broad Annotation

T-loop

Motif group

HL_58705.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

23

Unit IDs

7Z3O|1|1|C|188
7Z3O|1|1|U|189
7Z3O|1|1|G|190
7Z3O|1|1|G|191
7Z3O|1|1|A|192
7Z3O|1|1|A|193
7Z3O|1|1|C|194
7Z3O|1|1|G|195

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LY

60S ribosomal protein L26-like protein

Chain Le

60S ribosomal protein L32-like protein