HL_7Z3O_057

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAAAAGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_057 not in the Motif Atlas

Homologous match to HL_8C3A_058

Geometric discrepancy: 0.1305

The information below is about HL_8C3A_058

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_93324.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

26

Unit IDs

7Z3O|1|1|C|2652
7Z3O|1|1|A|2653
7Z3O|1|1|A|2654
7Z3O|1|1|A|2655
7Z3O|1|1|A|2656
7Z3O|1|1|G|2657
7Z3O|1|1|G|2658
7Z3O|1|1|G|2659

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like protein

Chain LT

60S ribosomal protein l21-like protein