HL_7Z3O_088

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGCUUAAAG

Length

9 nucleotides

Bulged bases

7Z3O|1|2|G|764, 7Z3O|1|2|U|766

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_088 not in the Motif Atlas

Homologous match to HL_4V88_203

Geometric discrepancy: 0.193

The information below is about HL_4V88_203

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47383.2

Basepair signature

cWW-F-F-cWW-F-F

Number of instances in this motif group

11

Unit IDs

7Z3O|1|2|C|763
7Z3O|1|2|G|764
7Z3O|1|2|C|765
7Z3O|1|2|U|766
7Z3O|1|2|U|767
7Z3O|1|2|A|768
7Z3O|1|2|A|769
7Z3O|1|2|A|770
7Z3O|1|2|G|771

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S4

Chain SJ

40S ribosomal protein s9-like protein

Chain SY

40S ribosomal protein S24