HL_7Z3O_102

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CUCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Z3O_102 not in the Motif Atlas

Geometric match to HL_1U9S_004

Geometric discrepancy: 0.1734

The information below is about HL_1U9S_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7Z3O|1|2|C|1393
7Z3O|1|2|U|1394
7Z3O|1|2|C|1395
7Z3O|1|2|A|1396
7Z3O|1|2|A|1397
7Z3O|1|2|G|1398

Current chains

Chain 2

18S rRNA

Nearby chains

Chain A

Putative guanine nucleotide-binding protein

Chain SR

40S ribosomal protein S17-like protein