3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GUCAUCAGC
Length
9 nucleotides
Bulged bases
7Z3O|1|2|G|1597
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7Z3O_105 not in the Motif Atlas
Homologous match to HL_4V88_220
Geometric discrepancy: 0.2482
The information below is about HL_4V88_220
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_01927.1
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7Z3O|1|2|G|1590
7Z3O|1|2|U|1591
7Z3O|1|2|C|1592
7Z3O|1|2|A|1593
7Z3O|1|2|U|1594
7Z3O|1|2|C|1595
7Z3O|1|2|A|1596
7Z3O|1|2|G|1597
7Z3O|1|2|C|1598

Current chains

Chain 2
18S rRNA

Nearby chains

Chain SQ
40S ribosomal protein S16-like protein
Chain ST
40S ribosomal protein S19-like protein
Chain SU
40S ribosomal protein S20-like protein
Chain Sd
Ribosomal protein uS14

Coloring options:


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