3D structure

PDB id
7ZAG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
GAU(B8H)CAACGC
Length
10 nucleotides
Bulged bases
7ZAG|1|2|G|943
QA status
Modified nucleotides: B8H

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ZAG|1|2|G|935
7ZAG|1|2|A|936
7ZAG|1|2|U|937
7ZAG|1|2|B8H|938
7ZAG|1|2|C|939
7ZAG|1|2|A|940
7ZAG|1|2|A|941
7ZAG|1|2|C|942
7ZAG|1|2|G|943
7ZAG|1|2|C|944

Current chains

Chain 2
rRNA

Nearby chains

Chain 4
Transfer RNA; tRNA
Chain K
30S ribosomal protein S9
Chain L
30S ribosomal protein S10
Chain P
30S ribosomal protein S14 type Z
Chain T
30S ribosomal protein S19

Coloring options:

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