HL_7ZFW_015

3D structure

PDB id

7ZFW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human 80S ribosome obtained from ssDNA coated grid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUUCCCGCGCGGGG

Length

14 nucleotides

Bulged bases

7ZFW|1|L5|U|513, 7ZFW|1|L5|U|514, 7ZFW|1|L5|C|515, 7ZFW|1|L5|C|517, 7ZFW|1|L5|C|519, 7ZFW|1|L5|G|642

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZFW|1|L5|U|512
7ZFW|1|L5|U|513
7ZFW|1|L5|U|514
7ZFW|1|L5|C|515
7ZFW|1|L5|C|516
7ZFW|1|L5|C|517
7ZFW|1|L5|G|518
7ZFW|1|L5|C|519
7ZFW|1|L5|G|642
7ZFW|1|L5|C|643
7ZFW|1|L5|G|644
7ZFW|1|L5|G|645
7ZFW|1|L5|G|646
7ZFW|1|L5|G|647

Current chains

Chain L5

RNA (615-MER)

Nearby chains