HL_7ZJW_006

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UCCAGGAUGCCAGUGGCAGCCCCACAAUCCAGG

Length

33 nucleotides

Bulged bases

7ZJW|1|I|G|130, 7ZJW|1|I|A|137, 7ZJW|1|I|C|142, 7ZJW|1|I|C|156

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|I|U|125
7ZJW|1|I|C|126
7ZJW|1|I|C|127
7ZJW|1|I|A|128
7ZJW|1|I|G|129
7ZJW|1|I|G|130
7ZJW|1|I|A|131
7ZJW|1|I|U|132
7ZJW|1|I|G|133
7ZJW|1|I|C|134
7ZJW|1|I|C|135
7ZJW|1|I|A|137
7ZJW|1|I|G|138
7ZJW|1|I|U|139
7ZJW|1|I|G|140
7ZJW|1|I|G|141
7ZJW|1|I|C|142
7ZJW|1|I|A|143
7ZJW|1|I|G|144
7ZJW|1|I|C|145
7ZJW|1|I|C|146
7ZJW|1|I|C|147
7ZJW|1|I|C|148
7ZJW|1|I|A|149
7ZJW|1|I|C|150
7ZJW|1|I|A|151
7ZJW|1|I|A|154
7ZJW|1|I|U|155
7ZJW|1|I|C|156
7ZJW|1|I|C|157
7ZJW|1|I|A|158
7ZJW|1|I|G|159
7ZJW|1|I|G|160

Current chains

Chain I

CrPV IRES

Nearby chains