HL_7ZJW_028

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGGCGGCGGCGCCGUCGUCG

Length

20 nucleotides

Bulged bases

7ZJW|1|L5|G|1361

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|C|1346
7ZJW|1|L5|G|1347
7ZJW|1|L5|G|1348
7ZJW|1|L5|C|1349
7ZJW|1|L5|G|1350
7ZJW|1|L5|G|1351
7ZJW|1|L5|C|1352
7ZJW|1|L5|G|1353
7ZJW|1|L5|G|1354
7ZJW|1|L5|C|1355
7ZJW|1|L5|G|1361
7ZJW|1|L5|C|1362
7ZJW|1|L5|C|1363
7ZJW|1|L5|G|1364
7ZJW|1|L5|U|1365
7ZJW|1|L5|C|1366
7ZJW|1|L5|G|1367
7ZJW|1|L5|U|1368
7ZJW|1|L5|C|1369
7ZJW|1|L5|G|1370

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LO

60S ribosomal protein eL13

Chain Ld

60S ribosomal protein L27a

Chain Le

60S ribosomal protein L29