HL_7ZJW_051

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AGUUCUCUU(PSU)U

Length

11 nucleotides

Bulged bases

7ZJW|1|L5|U|2474

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|A|2466
7ZJW|1|L5|G|2467
7ZJW|1|L5|U|2468
7ZJW|1|L5|U|2469
7ZJW|1|L5|C|2470
7ZJW|1|L5|U|2471
7ZJW|1|L5|C|2472
7ZJW|1|L5|U|2473
7ZJW|1|L5|U|2474
7ZJW|1|L5|PSU|2475
7ZJW|1|L5|U|2476

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LU

60S ribosomal protein L19

Chain LX

60S ribosomal protein eL22