HL_7ZJW_061
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGCGGCG
- Length
- 7 nucleotides
- Bulged bases
- 7ZJW|1|L5|C|3405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZJW_061 not in the Motif Atlas
- Geometric match to HL_5J7L_143
- Geometric discrepancy: 0.1574
- The information below is about HL_5J7L_143
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7ZJW|1|L5|C|3400
7ZJW|1|L5|G|3401
7ZJW|1|L5|C|3402
7ZJW|1|L5|G|3403
7ZJW|1|L5|G|3404
7ZJW|1|L5|C|3405
7ZJW|1|L5|G|3406
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein uL2
- Chain LJ
- 60S ribosomal protein eL8
- Chain LQ
- 60S ribosomal protein L15
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