HL_7ZJW_084

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGGAAAGGGGG

Length

11 nucleotides

Bulged bases

7ZJW|1|L5|A|4649, 7ZJW|1|L5|A|4650, 7ZJW|1|L5|G|4653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|L5|C|4645
7ZJW|1|L5|G|4646
7ZJW|1|L5|G|4647
7ZJW|1|L5|A|4648
7ZJW|1|L5|A|4649
7ZJW|1|L5|A|4650
7ZJW|1|L5|G|4651
7ZJW|1|L5|G|4652
7ZJW|1|L5|G|4653
7ZJW|1|L5|G|4654
7ZJW|1|L5|G|4655

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L3

Chain LR

60S ribosomal protein uL13