HL_7ZJW_095
3D structure
- PDB id
- 7ZJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome as it decodes the Sec-UGA codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGGCCGGUACAG
- Length
- 12 nucleotides
- Bulged bases
- 7ZJW|1|S2|C|73, 7ZJW|1|S2|U|76
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ZJW_095 not in the Motif Atlas
- Geometric match to HL_5U3G_001
- Geometric discrepancy: 0.3731
- The information below is about HL_5U3G_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7ZJW|1|S2|C|69
7ZJW|1|S2|G|70
7ZJW|1|S2|G|71
7ZJW|1|S2|C|72
7ZJW|1|S2|C|73
7ZJW|1|S2|G|74
7ZJW|1|S2|G|75
7ZJW|1|S2|U|76
7ZJW|1|S2|A|77
7ZJW|1|S2|C|78
7ZJW|1|S2|A|79
7ZJW|1|S2|G|80
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain LZ
- 60S ribosomal protein eL24
- Chain SR
- 40S ribosomal protein S6
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