HL_7ZJW_100

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCUCCGUG

Length

8 nucleotides

Bulged bases

7ZJW|1|S2|U|329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|C|323
7ZJW|1|S2|C|324
7ZJW|1|S2|U|325
7ZJW|1|S2|C|326
7ZJW|1|S2|C|327
7ZJW|1|S2|G|328
7ZJW|1|S2|U|329
7ZJW|1|S2|G|330

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LZ

60S ribosomal protein eL24

Chain SR

40S ribosomal protein S6