HL_7ZJW_101

3D structure

PDB id

7ZJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome as it decodes the Sec-UGA codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ZJW|1|S2|G|378
7ZJW|1|S2|U|379
7ZJW|1|S2|C|380
7ZJW|1|S2|G|381
7ZJW|1|S2|C|382
7ZJW|1|S2|C|383
7ZJW|1|S2|G|384
7ZJW|1|S2|U|385
7ZJW|1|S2|G|386
7ZJW|1|S2|C|387
7ZJW|1|S2|C|388

Current chains

Chain S2

18S rRNA

Nearby chains

Chain ST

40S ribosomal protein S8

Chain SW

40S ribosomal protein S11